Students who complete the module: will have gained skills in the up to date computer modeling techniques of molecular dynamics and analysis of in silico modeled protein, peptide and membrane structures and function.
• Must have knowledge about modern force fields.
• Must have knowledge about protein folding and function.
• Must have knowledge about the general building blocks of proteins and their chemistry.
• Must be able to evaluate protein structures.
• Must be able to apply the principals of protein structures and functions to real problems.
• Must be able to apply principals of Molecular dynamics
simulations to real problems.
• Must be able to evaluate modeled protein structures and function.
• Must be able to apply the properties and chemistry of the aminoacids to real world problems.
• Must be able to evaluate results from molecular dynamics simulations.
• Must have a basic understanding of molecular modelling.
• Must have a general understanding of the physics of protein dynamics and force field based modeling strategies.
• Must have a general knowledge molecular simulations.
Lectures with accompanying problem solving session.
This is a 5 ECTS course module and the work load is expected to be 150 hours for the student.
|Name of exam
|Type of exam
Active participation/continuous evaluation
|Type of grading
|Criteria of assessment
|The criteria of assessment are stated in the Examination Policies and Procedures
|Language of instruction
|Location of the lecture
|Responsible for the module
|Study Board of Mechanical Engineering and Physics
|Department of Materials and Production
|Faculty of Engineering and Science