Students who complete the module: will have gained skills in the up to date computer modeling techniques of molecular dynamics and analysis of in silico modeled protein, peptide and membrane structures and function.
• Must have knowledge about modern force fields
• Must have knowledge about protein folding and function
• Must have knowledge about the general building blocks of proteins and their chemistry
• Must be able to evaluate protein structures
• Must be able to apply the principals of protein structures and functions to real problems
• Must be able to apply principals of Molecular dynamics
simulations to real problems
• Must be able to evaluate modeled protein structures and function
• Must be able to apply the properties and chemistry of the aminoacids to real world problems
• Must be able to evaluate results from molecular dynamics simulations
• Must have a basic understanding of molecular modelling
• Must have a general understanding of the physics of protein dynamics and force field based modeling strategies
• Must have a general knowledge molecular simulations
Lectures with accompanying problem solving session.
This is a 5 ECTS course module and the work load is expected to be 150 hours for the student.
|Name of exam||Molecular Simulations|
|Type of exam|
Active participation/continuous evaluation
|Type of grading||Internal examination|
|Criteria of assessment||As stated in the Joint Programme Regulations.
|Danish title||Molekylær simulering|
|Language of instruction||English|
|Location of the lecture||Campus Aalborg|
|Responsible for the module|
|Study Board||Study Board of Mathematics, Physics and Nanotechnology|
|Department||Department of Mathematical Sciences|
|Faculty||Faculty of Engineering and Science|